generate ggplot objects for each of the curve fits in a MALDIassay object — plotCurves • MALDIcellassay

generate ggplot objects for each of the curve fits in a MALDIassay object

Usage

plotCurves(object, mzIdx = NULL, errorbars = c("none", "sd", "sem"))

Arguments

object: object of class MALDIassay
mzIdx: numeric, indicies of mz values to plot (see getPeakStatistics()). Note, fc_thresh and R2_thresh filters do not apply if mzIdx is set!
errorbars: character, add error bars to plot. Either standard error of the mean (sem) or standard deviation (sd) in regards to the measurement replicates or no errorbars (none).

Value

list of ggplot objects

Examples


data(Blank2022res)
plotCurves(Blank2022res, mzIdx = 2, errorbars = "sd")